Welcome to scoria’s documentation!

scoria is a lightweight molecular dynamics library

• 1. The Molecule Class
  • 1.1. Initiating and using the object
  • 1.2. Function Definitions
• 2. The AtomsAndBonds Class
  • 2.1. Rationale of the AtomsAndBonds functions
  • 2.2. Function Definitions
• 3. The FileIO Class
  • 3.1. File Types and Formats
  • 3.2. Function Definitions
• 4. scoria.Geometry module
• 5. scoria.Information module
• 6. scoria.Manipulation module
• 7. scoria.OtherMolecules module
• 8. scoria.Quaternion module
• 9. scoria.Selections module
• 10. reST Documentation Guide
  • 10.1. Intro
  • 10.2. Basics
  • 10.3. Advanced

Indices and tables

• Index
• Module Index
• Search Page