Bug in SaveToSDF.py module

Computer-Aided Drug Design at the Durrant Lab Forums Gypsum-DL Bug in SaveToSDF.py module

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    • #145717
      Alex
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      Hi,

      It seems that there is a bug in the save_to_sdf function (SaveToSDF.py module). It does not save only 2D information even if the '2d_output_only' option is activated. The simple workaround is to change the "for" loop:
      for m in contnr.mols:
      if not params['2d_output_only']:
      m.load_conformers_into_rdkit_mol()
      w.write(m.rdkit_mol)
      Best,
      Alex

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