Ubuntu

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    • #13586
      Yash
      Guest

      #The latest Debian builds have Python3-rdkit available.
      #Somehow Auto-grow cannot call newer version of rdkit and keeps on giving following error

      Traceback (most recent call last):
      File "RunAutogrow.py", line 657, in <module>
      vars, printout = load_in_commandline_parameters(INPUTS)
      File "/home/yash/autogrow4-4.0.1/autogrow/user_vars.py", line 986, in load_in_commandline_parameters
      check_dependencies()
      File "/home/yash/autogrow4-4.0.1/autogrow/user_vars.py", line 578, in check_dependencies
      raise ImportError("You need to install rdkit and its dependencies.")
      ImportError: You need to install rdkit and its dependencies.

    • #13587
      Yash
      Guest

      yash@aB8luc:~/autogrow4-4.0.1$ sudo apt-get install python3-rdkit
      Reading package lists… Done
      Building dependency tree
      Reading state information… Done
      python3-rdkit is already the newest version (201903.1-2).
      0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.

    • #13594
      Yash
      Guest

      Solution!!
      $ alias python=python3

    • #13936
      Jacob Durrant
      Keymaster

      Sorry for my delay in responding, Yash. Very happy you were able to resolve the problem. Much thanks, too, for posting your solution to help others. Take care.

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