Docking with ds or ss DNA

[Cassidy Terrell]

Hello,

I am trying to dock a small segment of ds DNA and ss DNA (not at the same time) and I keep getting the error "no such file or directory". I’ve tested the protein file with other small molecules, and it runs to completion – so I know the protein PDB file is fine. Each time I try a different ds DNA or ss DNA segment I get the same error. Any thoughts on how to work around the error?

Best
Cassidy

[Author]

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