Issue with saving files

[Nikhil Bajaj]

Gypsum was given input of .smi file, with arguments –add_pdb_output and –add_html_output.
HTML output was successful, showing 5 conformations of input file in 2D, but no pdb files were generated and the created .sdf file was empty.

Error message:

Saving molecules associated with…
OC@H[C@@H]1O[C@@H]2C@@HC[C@H](NC(
C3=CC=CC=C3)=O)C@@HO2
Illegal instruction (core dumped)

(Note: Python 3 is being used to run the program)

Any help would be appreciated.

[Nikhil Bajaj]

Sorry, issue was local and was resolved.

[Jacob Durrant]

Happy to hear that you resolved the issue in the end. Much thanks for your interest in Gypsum-DL!

[Author]

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