Computer-Aided Drug Design at the Durrant Lab › Forums › Pyrite › Loading takes a very long time
- This topic has 1 reply, 1 voice, and was last updated 5 years ago by
Jacob Durrant.
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- September 7, 2020 at 4:14 pm #15755
Sam Lapere
GuestHi,
first thanks for developing this tool, it’s great to be able to import VMD simulations into Blender.
I have a 700 frame animation of a molecule simulated with Gromacs (*.xtc trajectory files). I converted the trajectory to pdb with VMD and am loading it with Pyrite. However the loading takes ages. I exported a pdb of a subset of only 5 frames to see if it actually can be loaded (obj mesh is ~100 MB, pdb file is about 20 MB), but even that seems to keep loading without stopping.
Do you have any suggestions on what might be the issue?
Sam
- September 12, 2020 at 5:51 pm #15880
Jacob Durrant
KeymasterHi Sam. Much thanks for your interest in Pyrite. It does seem odd that it would take so long to load a five-frame trajectory. Have you removed the water molecules, I wonder? That could slow things down. If not, I’d be happy to test your trajectory on my setup to debug. I’ll send you a private message with my email address. Take care.
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